NOAH: Crop resilience through AI-guided microbiome engineering

Status: Active
Productive and Profitable Cropping Resource Use Efficiency
Cartoon of a soil microbiome around a plant root

Bioinoculants - microbes that enhance plant growth, nutrient uptake and stress resilience - show great promise, yet their field effectiveness remains inconsistent. Current bioinoculant development depends on empirical evaluation, constrained by limited understanding of microbiome ecology.

The NOAH project will establish the first AI foundation model for crop microbiomes: ARCA (AI-guided Root microbiome engineering for ClimAte-resilient and nutritious crops).

ARCA integrates microbial functional traits, host genotype, and environmental metadata to model and design microbiome configurations that optimise crop performance. ARCA will be trained on curated public microbiome datasets and tailored using high-resolution data from five major crops: wheat, tomato, faba bean, oilseed rape, and apple. Iterative design–build–test–learn (DBTL) cycles under controlled and field conditions ensure a progressive refinement of model accuracy and generalisation.

NOAH aims to identify beneficial microbial consortia and reveal missing functional components in suboptimal microbiomes. This breakthrough AI approach will transform microbiome engineering, accelerating the effective deployment of bioinoculants that enhance crop climate resilience and nutritional quality in a sustainable man

Partners

Utrecht University, Aarhus University, INRA, The Hyve

Funders


Duration

2027-2031

Niab researchers

Dr Matevz Papp-Rupar

Integrated Crop Protection Lead

Dr Eric Ober

Research agronomist (crop physiology)

Dr Tom Passey

Principal Scientific Assistant