NIAB - National Institute of Agricultural Botany

Assay information: HvANT2_C4289T

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Narrative

The presence (to varying degrees of intensity) or absence of anthocyanin pigmentation within plant tissues (awn, auricle, lemma nerve) is controlled by the genetic locus ANTHOCYANINLESS 2 (ANT2), thought to be encoded by HvbHLH1. A 16bp exonic deletion within HvbHLH1 results in a truncated predicted protein that is diagnostic for the recessive ant2 allele that results in the absence of anthocyanin in all tissues. This assay tests for a SNP found to be in perfect linkage disequilibrium with the 16bp deletion in all UK barley varieties assayed to date. SNP T = anthocyanin non-expresser (diagnostic for haplotype 1), SNP C = anthocyanin expresser. Note: see position 4289bp in reference sequence alignment.

Note: a marker designed to directly assay the 16bp HvbHLH1 InDel failed to convert to the KASPar platform. However, a PCR/agarose-gel based marker for the 16bp InDel is published (PMID: 21115826).

References

PMID:21115826

Map AGOUEB ver1
Chromosome 2H
cM position 96.82
Assay ID 9720085
Assay Name HvANT2_C4289T
Reference Allele Sequences
Sequence ID Allele Phenotype
gi||gb|HM370325 C anthocyanin expresser (cv Swift, haplotype 2)
gi||gb|HM370331 C anthocyanin expresser (cv Acrobat, haplotype 3)
gi||gb|HM370379 C anthocyanin expresser (cv Token, haplotype 4)
gi||gb|HM370298 G anthocyanin non-expresser (cv Duet, haplotype 1)
Polymorphism sequence GGTGTTCGACGCCAT[C/T]AAGAGCCTCCGCCTG
Reference allele sequence alignment
CLUSTAL W(1.60) multiple sequence alignment



HM370325_Swift_hap2 AAAATTAATCCTCCACTCATGTCTAGCTTAGTTTATCTCTTACTTTCTTGGTTTGTTCCA
HM370331_Acrobat_hap3 AAAATTAATCCTCCACTCATGTCTAGCTTAGTTTATCTCTTACTTTCTTGGTTTGTTCCA
HM370379_Token_hap4 AAAATTAATCCTCCACTCATGTCTAGCTTAGTTTATCTCTTACTTTCTTGGTTTGTTCCA
HM370298_Duet_hap1 AAAATTTCTCCTCCACTCATGTCTAGCTTAGTTTATCTCTTACTTTCTTGGTTTGTTCCA


HM370325_Swift_hap2 GCTTTCGATCTAGTATATACAGCATGTTCTTTGTAATCTTCGTTGAGAAATCTTCCCAGG
HM370331_Acrobat_hap3 GCTTTCGATCTAGTATATACAGCATGTTCTTTGTAATCTTCGTTGAGAAATCTTCCCAGG
HM370379_Token_hap4 GCTTTCGATCTAGTATATACAGTATGTTCTTTGTAATCTTCGTTGAGAAATCTTCCCAGG
HM370298_Duet_hap1 GCTTTCGATCTAGTATATACAGTATGTTCTTTGTAATCTTCGTTGAGAAATCTTCCGAGG


HM370325_Swift_hap2 AGTTTCTTAATTAGCACCAGTGCAACGGAGTGGAGGGATTTCGATCAGCTAGCATGAACT
HM370331_Acrobat_hap3 AGTTTCTTAATTAGCACCAGTGCAACGGAGTGGAGGGATTTCGATCAGCTAGCATGAACT
HM370379_Token_hap4 AGTTTCTTAATTAGCACCAGTGCAACAGAGTGGAGGGATTTCGATCAGCTAGCATGAACT
HM370298_Duet_hap1 AGTTTCTTAATTAGCACCAGTGCAACAGAGTGGAGGGATTTCGATCAGCTAGCATGAACT


HM370325_Swift_hap2 AAATTATCCAAGAAGATGCATCATGCTCACTATAAACACAAGAGATGGAACCATATATAG
HM370331_Acrobat_hap3 AAATTATCCAAGAAGATGCATCATGCTCACTATAAACACAAGAGATGGAACCATATATAG
HM370379_Token_hap4 AAATTATCCAAGAAGATGCATCATGCTCACTATAAACACAAGAGATGGAACCATATATAG
HM370298_Duet_hap1 AAATTATCCAAGAAGATGCATCATGCTCACTATAAACACAAGAGATGGAACCATATATAG


HM370325_Swift_hap2 CTTCATTGATTTGTTTATTTTTGCCTCCTTGCTTGCTCTAACTTCACCTCGTCTGCATCA
HM370331_Acrobat_hap3 CTTCATTGATTTGTTTATTTTTGCCTCCTTGCTTGCTCTAACTTCACCTCGTCTGCATCA
HM370379_Token_hap4 CTTCATTGATTTGTTTATTTTTGCCTCCTTGCTTGCTCTAACTTCACCTCGTCTGCATCA
HM370298_Duet_hap1 CTTCATTGATTTGTTTATTTTTGCCTCCTTGCTTGCTCTAACTTCACCTCGTCTGCATCA


HM370325_Swift_hap2 TGCATATGAAATGAAGGAAGGAAATAATATGGTAATGGCGCTACCAATAGTTCGTCCGAG
HM370331_Acrobat_hap3 TGCATATGAAATGAAGGAAGGAAATAATATGGTAATGGCGCTACCAATAGTTCGTCCGAG
HM370379_Token_hap4 TGCATATGAAATGAAGGAAGGAAATAATATGGTAATGGCGCTACCAATAGTTCGTCCGAG
HM370298_Duet_hap1 TGCATATGAAATGAAGGAAGGAAATAATATGGTAATGGCGCTACCAATAGTTCGTCCGAG


HM370325_Swift_hap2 CCAGGAAGAACCGCCGACGGGGAAGCAATTCAGCTACCAGCTCGCTGCCGCTGTGAGGAG
HM370331_Acrobat_hap3 CCAGGAAGAACCGCCGACGGGGAAGCAATTCAGCTACCAGCTCGCTGCCGCTGTGAGGAG
HM370379_Token_hap4 CCAGGAAGAACCGCCGACGGGGAAGCAATTCAGCTACCAGCTCGCTGCCGCTGTGAGGAG
HM370298_Duet_hap1 CCAGGAAGAACCGCCGACGGGGGAGCAATTCAGCTACCAGCTCGCTGCCACTGTGAGGAG


HM370325_Swift_hap2 CATCAATTGGAGCTACGCCATATTCTGGTCCATTTCAACCAGCCGTCCAGGGTAGGGAGT
HM370331_Acrobat_hap3 CATCAATTGGAGCTACGCCATATTCTGGTCCATTTCAACCAGCCGTCCAGGGTAGGGAGT
HM370379_Token_hap4 CATCAACTGGAGCTACGCCATATTCTGGTCCATTTCAACCAGCCGTCCAGGGTAGGGAGT
HM370298_Duet_hap1 CATCAACTGGAGCTACGCCATATTCTGGTCCATTTCAACCAGCCGTCCAGGGTAGGGAGT


HM370325_Swift_hap2 GCATCAGATTGATGATCACTTGGCACTGGCCGTTTCCTTTCCTCTTATGATCCGTTTGTT
HM370331_Acrobat_hap3 GCATCAGATTGATGATCACTTGGCACTGGCCGTTTCCTTTCCTCTTATGATCCGTTTGTT
HM370379_Token_hap4 GCATCAGATTGATGATCACTTGGCACTGGCCGTTTCCTTTCCTCTTATGATCCGTTTGTT
HM370298_Duet_hap1 GCATCAGATTGATGATCACTTGGCACTGGCCGTTTCCTTTCCTCTTATGATCCGTTTGTT


HM370325_Swift_hap2 ATGTAGGGTACTGACCTGGAAGGACGGGTTCTACAACGGCGAGATAAAGACGAGGAAGGT
HM370331_Acrobat_hap3 ATGTAGGGTACTGACCTGGAAGGACGGGTTCTACAACGGCGAGATAAAGACGAGGAAGGT
HM370379_Token_hap4 ATGTAGGGTACTGACCTGGAAGGACGGGTTCTACAACGGCGAGATAAAGACGAGGAAGGT
HM370298_Duet_hap1 ATGTAGGGTACTGACCTGGAAGGACGGGTTCTACAACGGCGAGATAAAGACGAGGAAGGT


HM370325_Swift_hap2 CACCAGCTCGGCGGACCTCACCGCCGACCAGCTCCTCCTGCAGAGGAGCGAGCAGCTGCG
HM370331_Acrobat_hap3 CACCAGCTCGGCGGACCTCACCGCCGACCAGCTCCTCCTGCAGAGGAGCGAGCAGCTGCG
HM370379_Token_hap4 CACCAGCTCGGCGGACCTCACCGCCGACCAGCTCGTCCTGCAGAGGAGCGAGCAGCTGCG
HM370298_Duet_hap1 CACCAGCTCGGCGGACCTCACCGCCGACCAGCTCCTCCTGCAGAGGAGCGAGCAGCTGCG


HM370325_Swift_hap2 GGAGCTCTACCAGTCCCTCCTGTCCGGCCAGTGCGACCACCGGGGGAGGCGCCCGGCCGC
HM370331_Acrobat_hap3 GGAGCTCTACCAGTCCCTCCTGTCCGGCCAGTGCGACCACCGGGGGAGGCGCCCGGCCGC
HM370379_Token_hap4 GGAGCTCTACCAGTCCCTCTTGTCCGGCCAGTGCGACCACCGGGGGAGGCGCCCGGCCGC
HM370298_Duet_hap1 GGAGCTCTACCAGTCCCTCCTGTCCGGCCAGTGCGACCACCGGGGGAGGCGCCCGGCCGC


HM370325_Swift_hap2 CGCGCTCTCGCCGGAGGACCTCGGGGACGCCGAATGGTACTACGCCGTCTGCATGAGCTA
HM370331_Acrobat_hap3 CGCGCTCTCGCCGGAGGACCTCGGGGACGCCGAATGGTACTACGCCGTCTGCATGAGCTA
HM370379_Token_hap4 CGCGCTCTCGCCGGAGGACCTCGGGGACGCCGAATGGTACTACGCCGTCTGCATGAGCTA
HM370298_Duet_hap1 CGCGCTCTCGCCGGAGGACCTCGGGGACGCCGAATGGTACTACGCCGTCTGCATGAGCTA


HM370325_Swift_hap2 TGCCTTCCGCCCTGGCCAAGGGTATGTACTACTCCGTAGTATGCTTCAAGAACAACTCCA
HM370331_Acrobat_hap3 TGCCTTCCGCCCTGGCCAAGGGTATGTACTACTCCGTAGTATGCTTCAAGAACAACTCCA
HM370379_Token_hap4 TGCCTTCCGCCCTGGCCAAGGGTATGTACTACTCCGTAGTATGCTTCAAGAACAACTCCT
HM370298_Duet_hap1 TGCCTTCCGCCCTGGCCAAGGGTATGTACTACTCCGTAGTATGCTTCAAGAACAACTCCT


HM370325_Swift_hap2 CTGATCCATAACGGCCGATGCCTGCGCACCTACAGTAGTTAGCAATCATCTTATCTTGAT
HM370331_Acrobat_hap3 CTGATCCATAACGGCCGATGCCTGCGCACCTACAGTAGTTAGCAATCATCTTATCTTGAT
HM370379_Token_hap4 CTGATCCACAAC---------------------AATAGTTAACAATCATCTTATCTTGAT
HM370298_Duet_hap1 CTGATCCATAACGGCCGATGCCTGCGCACCTACAGTAGTTAGCAATCATCTTATCTTGAT


HM370325_Swift_hap2 AAGATAAGATTTACTTTGCTAGAGAGTGAAAACTACAACGTTTGCTATTTCGTCATCAGG
HM370331_Acrobat_hap3 AAGATAAGATTTACTTTGCTAGAGAGTGAAAACTACAACGTTTGCTATTTCGTCATCAGG
HM370379_Token_hap4 AAGATGAGAGTTATTTTGCTAGAGAGTGAAAACTACAACGTTTGCTATTTCGTCATCAGG
HM370298_Duet_hap1 AAGATAAGATTTACTTTGCTAGAGAGTGAAAACTACAACGTTTGCTATTTCGTCATCAGG


HM370325_Swift_hap2 TTGCCAGGCAGAAGCTTTGCGAGCAACGAGCCTGTTTGGCTGTGCAATGCTCAGTGCGCA
HM370331_Acrobat_hap3 TTGCCAGGCAGAAGCTTTGCGAGCAACGAGCCTGTTTGGCTGTGCAATGCTCAGTGCGCA
HM370379_Token_hap4 TTGCCAGGCAGAAGCTTTGCGAGCAACGAGCCTGTTTGGCTGTGCAATGCTCAGTGCGCA
HM370298_Duet_hap1 TTGCCAGGCAGAAGCTTTGCGAGCAACGAGCCTGTTTGGCTGTGCAATGCTCAGTGCGCA


HM370325_Swift_hap2 GACACCAAAACTTTCCAACGCTCGCTCTTAGCGAAGGTACGTTTGATTGCACCGCCCGAG
HM370331_Acrobat_hap3 GACACCAAAACTTTCCAACGCTCGCTCTTAGCGAAGGTACGTTTGATTGCACCGCCCGAG
HM370379_Token_hap4 GACACCAAAACTTTCCAACGCTCGCTCTTAGCGAAGGTACGTTTGATTGCACCGCCCGAG
HM370298_Duet_hap1 GACACCAAAACTTTCCAACGCTCGCTCTTAGCGAAGGTACGTTTGATTGCACCGCCCGAG


HM370325_Swift_hap2 TGTCTCGCAAGCCTCACTCTCATGTAGTCCCTCCGTAAATAAATGGAGTATAAGAGTGCT
HM370331_Acrobat_hap3 TGTCTCGCAAGCCTCACTCTCATGTAGTCCCTCCGTAAATAAATGGAGTATAAGAGTGCT
HM370379_Token_hap4 TGTCTCGCAAGCCTCACTCTCATGTAGTCCCTCCGTAAATAAATGGAGTATAAGAGTGTT
HM370298_Duet_hap1 TGTCTCGCAAGCCTCACTCTCATGTAGTCCCTCCGTAAATGAATGGAGTATAAGAGTGTT


HM370325_Swift_hap2 TAGATCACTACTTAGTGATATAAACGCTTTTATGTTCCTTTACGAAGGGAGTACTATCTG
HM370331_Acrobat_hap3 TAGATCACTACTTAGTGATATAAACGCTTTTATGTTCCTTTACGAAGGGAGTACTATCTG
HM370379_Token_hap4 TAGATCACTACTTAGTGATCTAAACGCTTTTATGTTTCTTTACGAAGGGAGTACTATCTG
HM370298_Duet_hap1 TAGATCACTACTTAGTGATATAAACGCTTTTATGTTTCTTTACGAAGGGAGTACTATCTG


HM370325_Swift_hap2 CCTAATATGTACCCGATCTTGACTAATACCATGTTGTCTACTGTGTACTTTTGGCGCACA
HM370331_Acrobat_hap3 CCTAATATGTACCCGATCTTGACTAATACCATGTTGTCTACTGTGTACTTTTGGCGCACA
HM370379_Token_hap4 CCTAATATGTACCCGATCTTGACTAATACCATGTTGTCTACTGTGTACTTTTGGCGCACA
HM370298_Duet_hap1 CCTAATATGTACCCGATCTTGACTAATACCATGTTGTCTACTGTGTACTTTTGGCGCACA


HM370325_Swift_hap2 TACTATATCTGTCGGCTAAATCAGACGACGTCTATCCAGGTTAGCTAGCGCATGTCATGC
HM370331_Acrobat_hap3 TACTATATCTGTCGGCTAAATCAGACGACGTCTATCCAGGTTAGCTAGCGCATGTCATGC
HM370379_Token_hap4 TACTATATCTGTCGGCTAAATCAGACGACGTCTATCCAGGTTAGCTAGCGCATGTCATGC
HM370298_Duet_hap1 TACTATATCTGTCGGCTAAATCAGACGACGTCTATTCAGGTTAGCTAGCGCATGTCATGC


HM370325_Swift_hap2 ACCCTATATCTGTGTATACTGTTCATGTTTCTGACCCCAGCTGCACGGGTGACAATATTT
HM370331_Acrobat_hap3 ACCCTATATCTGTGTATACTGTTCATGTTTCTGACCCCAGCTGCACGGGTGACAATATTT
HM370379_Token_hap4 ACCCTATATCTGTGTATACTGTTCATGTTTCTGACCCCAGCTGCACGGGTGACAATTTTT
HM370298_Duet_hap1 ACCCTATATCTGTGTATACTGTTCATGTTTCTGACCCCAGCTGCACGGGTGACAATTTTT


HM370325_Swift_hap2 TTTCTTCAGACGGTCGCCTGCATTCCCTTGATGGGTGGTGTGCTTGAGCTCGGGACGACA
HM370331_Acrobat_hap3 TTTCTTCAGACGGTCGCCTGCATTCCCTTGATGGGTGGTGTGCTTGAGCTCGGGACGACA
HM370379_Token_hap4 TTTCTTCAGACGGTCGCCTGCATTCCCTTGATGGGTGGTGTGCTTGAGCTCGGGACGACA
HM370298_Duet_hap1 TTTCTTCAGACGGTCGCCTGCATTCCCTTGATGGGTGGTGTGCTTGAGCTCGGGACGACA


HM370325_Swift_hap2 GATACCGTGAGTTTTCCTCGCATCAAGCACATGATATTCACTTACGGTTTAAAATTAAAC
HM370331_Acrobat_hap3 GATACCGTGAGTTTTCCTCGCATCAAGCACATGATATTCACTTACGGTTTAAAATTAAAC
HM370379_Token_hap4 GATACCGTGAGCTTTCCTCGCATCAAGCACATGATATTCACTTACGGTTTAAAATTAAAC
HM370298_Duet_hap1 GATACCGTGAGCTTTCCTCGCATCAAGCACATGATATTCACTTACGGTTTAAAATTAAAC


HM370325_Swift_hap2 GGAAAACTCACTATTAGTAACGCTTTGTCTCATCAAGCACATCGAAATTGCAAAATTTAA
HM370331_Acrobat_hap3 GGAAAACTCACTATTAGTAACGCTTTGTCTCATCAAGCACATCGAAATTGCAAAATTTAA
HM370379_Token_hap4 GGAAAACTCACTATTAGTAACGCTTTGTCGCATCAAGCACATCGAAATTGCAAAATTTAA
HM370298_Duet_hap1 GGAAAACTCACTATTAGTAACGCTTTGTCGCATCAAGCACATCGAAATTGCAAAATTTAA


HM370325_Swift_hap2 CCCGGGTTCCATGGAGCCTTGTTGTTAAGAAAAACACAACAGAAGTTGTGAGCACCTATA
HM370331_Acrobat_hap3 CCCGGGTTCCATGGAGCCTTGTTGTTAAGAAAAACACAACAGAAGTTGTGAGCACCTATA
HM370379_Token_hap4 CCCGGGTTCCATGGAGCCTTGTTGTTAAGAAAAACACAACAGAAGTTGTGAGCACCTATA
HM370298_Duet_hap1 CCCGGGTTCCATGGAGCCTTGTTGTTAAGAAAAACACAACAGAAGTTGTGAGCACCTATA


HM370325_Swift_hap2 TATTTCCGTTCAGTACATCTTGCCATATGTGGGGGTAGACAACAAAGACAAATATGCGGA
HM370331_Acrobat_hap3 TATTTCCGTTCAGTACATCTTGCCATATGTGGGGGTAGACAACAAAGACAAATATGCGGA
HM370379_Token_hap4 TATTTCCGTTCAGTACATCTTGCCATATGTGG--GTAGACAACAAAGACAAATATGAGGA
HM370298_Duet_hap1 TATTTCCGTTCAGTACATCTTGCCATATGTGG--GTAGACAACAAAGACAAATATGAGGA


HM370325_Swift_hap2 TCTACAAATAGCCAATAATAGATGTGCTAGTATTTCCAAAACCACACATTGTCATCTTGT
HM370331_Acrobat_hap3 TCTACAAATAGCCAATAATAGATGTGCTAGTATTTCCAAAACCACACATTGTCATCTTGT
HM370379_Token_hap4 TCTACAAATAGCCAATAATAGATGTGCTAGTATTTCCAAAACTACACATTGTCATCTTGT
HM370298_Duet_hap1 TCTACAAATAGCCAATAATAGATGTGCTAGTATTTCCAAAACTACACATTGTCATCTTGT


HM370325_Swift_hap2 GTAGCTCACATGCATGTGTTATAGTGTTTATTATCGAATGCTACGTATATGCTAGTATAG
HM370331_Acrobat_hap3 GTAGCTCACATGCATGTGTTATAGTGTTTATTATCGAATGCTACGTATATGCTAGTATAG
HM370379_Token_hap4 GTAGCTCACATGCATGTGTTATAGTGTTTATTATCGAATGCTACGTATATGCTAGTATAG
HM370298_Duet_hap1 GTAGCTCACATGCATGTGTTATAGTGTTTATTATCGAATGCTACGTATATGCTAGTATAG


HM370325_Swift_hap2 ATCTATATATACATCTAGGTAGACTTGTTTTACTGTTTTTTTTCAAAGTTGTAAATATTA
HM370331_Acrobat_hap3 ATCTATATATACATCTAGGTAGACTTGTTTTACTGTTTTTTTTCAAAGTTGTAAATATTA
HM370379_Token_hap4 ATCTATATATACATCTAGGTAGACTTGTTTTACTGTTTTTTTTCAAAGTTGTAAATATTA
HM370298_Duet_hap1 ATCTATATATACATCTAGGTAGACTTGTTTTACTGTTTTTTTTCAAAGTTGTAAATATTA


HM370325_Swift_hap2 TTTGATTTTTTTTCCAAAATTTCAGTCTCACTACAACCCTGATCTCCCAATTATTCGCTC
HM370331_Acrobat_hap3 TTTGATTTTTTTTCCAAAATTTCAGTCTCACTACAACCCTGATCTCCCAATTATTCGCTC
HM370379_Token_hap4 TTTGATTTTTTTTCCAAAATTTCAGTCTCACTACAACCCTGATCTCCCAATTATTCGCTC
HM370298_Duet_hap1 TTTGATTTTTTTTCCAAAATTTCAGTCTCACCACAACCCTGATCTCCCAATTATTCGCTC


HM370325_Swift_hap2 AAGCTGCCATGTCAACTATGGTACAAGTTTGAAGTTTGTTACCCTTTCATTCTTTCCCTG
HM370331_Acrobat_hap3 AAGCTGCCATGTCAACTATGGTACAAGTTTGAAGTTTGTTACCCTTTCATTCTTTCCCTG
HM370379_Token_hap4 AAGCTGCCATGTCAACTATGGTACAAGTTTGAAGTTTGTTACCCTTTCATTCTTTCCCTG
HM370298_Duet_hap1 AAGCTGCCATGTCAACTATGGTACAAGTTTGAAGTTTGTTACCCTTTCATTCTTTCCGTG


HM370325_Swift_hap2 CCCTTGTTGCTTACAAATGCGAGCTTTGCTACAAGTACAGACGTTTTACAGGATTTTTAC
HM370331_Acrobat_hap3 CCCTTGTTGCTTACAAATGCGAGCTTTGCTACAAGTACAGACGTTTTACAGGATTTTTAC
HM370379_Token_hap4 CCCTTGTTGCTTACAAATGCGAGCTTTGCTACAAGTACGGACGTTTTACAGGATTTTTAC
HM370298_Duet_hap1 CCCTTGTTGCTTACAAATGCGAGCTTTGCTACAAGTACGGACGTTTTACAGGATTTTTAC


HM370325_Swift_hap2 AGGCAAAGTTGAAGTGGCTTATTTTAATTGGTACTTAGATGAGGCCGGCCCTAAGAATCA
HM370331_Acrobat_hap3 AGGCAAAGTTGAAGTGGCTTATTTTAATTGGTACTTAGATGAGGCCGGCCCTAAGAATCA
HM370379_Token_hap4 AGGCAAAGTTGAAGTGGCTTATTTTAATTGATACTTAGATGAGGCCGGCCCTAAAAATCA
HM370298_Duet_hap1 AGGCAAAGTTGAAGTGGCTTATTTTAATTGGTACTTAGATGAGGCCGGTCCTAAGAATCG


HM370325_Swift_hap2 AGGGGAGATTAGTGAGGAGAAAAACCCATCAGTCTGTAACCTTCTGTAAAAAA--GGTCC
HM370331_Acrobat_hap3 AGGGGAGATTAGTGAGGAGAAAAACCCATCAGTCTGTAACCTTCTGTAAAAAA--GGTCC
HM370379_Token_hap4 AGGGGAGATTAGTGAGGAGAAAAATCCATCAGTCTGTAACCTTCTGTAAAAAAAAGGTCC
HM370298_Duet_hap1 AGGGGAGATTAGTGAGGAGAAAAACCCATCAGTCTGTAACCTTCTGTAAAAAAA-GGTCC


HM370325_Swift_hap2 GTAGGTCTGGCATTTTCCTATAAATGCGGACGAAACCAATATCTTTTGAGGCCTCTGCTA
HM370331_Acrobat_hap3 GTAGGTCTGGCATTTTCCTATAAATGCGGACGAAACCAATATCTTTTGAGGCCTCTGCTA
HM370379_Token_hap4 GTAGGTCTGGCATTTTCCTACAAATGCGGACGAAACCAATCTCTTTTGAGGCCTCTGCTA
HM370298_Duet_hap1 GTAGGTCTGGCATTTTCCTACAAATGCGGACGAAACCAATCTCTTTTGAGGCCTCTGCTA


HM370325_Swift_hap2 CGTTATTCTAGTGTGTTATTTTTCAAGAACAAGAAACACAATGCTGCATGTCATTGTCAT
HM370331_Acrobat_hap3 CGTTATTCTAGTGTGTTATTTTTCAAGAACAAGAAACACAATGCTGCATGTCATTGTCAT
HM370379_Token_hap4 CGTTATTCTAGTGTGTTATTTTTCAAGAACAAGAAACACAATGCTGCATGTCATTGTCAT
HM370298_Duet_hap1 CGTTATTCTAGTGTGTTATTTTTCAAGAACAAGAAACACAATGCTGCATGTCATTGTCAT


HM370325_Swift_hap2 TAAGAAGGAAAGGGAGTTAATTACAAGCAAATAGTCGTGACAAAGCATGTAGTGTTGTTA
HM370331_Acrobat_hap3 TAAGAAGGAAAGGGAGTTAATTACAAGCAAATAGTCGTGACAAAGCATGTAGTGTTGTTA
HM370379_Token_hap4 TAAGAAGGAAAGGGAGTTAATTAGAAGCAAATAGTCGTGACAAAGCATGTAGTGTTGTTA
HM370298_Duet_hap1 TAAGAAGGAAAGGGAGTTAATTAGAAGCAAATAGTCGTGACAAAGCATGTAGTGTTGTTA


HM370325_Swift_hap2 TACCACACGTGAGACCACCGCCACCACATTCATATCTAGGCCCACTCCTCCCTAATCTTT
HM370331_Acrobat_hap3 TACCACACGTGAGACCACCGCCACCACATTCATATCTAGGCCCACTCCTCCCTAATCTTT
HM370379_Token_hap4 TACCACACGTGAGACCACCGCCACCACATTCATATCTAGGCCCACTCCTCCCTAATCTTT
HM370298_Duet_hap1 TACCACACGTGAGACCACCGCCACCACATTCATATCTAGGCCCACTCCTCCCTAATCTTT


HM370325_Swift_hap2 GTCACTGACTGCCTAGCCTTTTTGGAAAGCATAAGTTCTTGTGCCGCCGGTGCGACCACT
HM370331_Acrobat_hap3 GTCACTGACTGCCTAGCCTTTTTGGAAAGCATAAGTTCTTGTGCCGCCGGTGCGACCACT
HM370379_Token_hap4 GTCACTGACTGCCTAGCCTTTTTGGAAAGCATAAGTTCTTGTGCCGCCGGTGCGACCACT
HM370298_Duet_hap1 GTCACTGACTGCCTAGCCTTTTTGGAAAGCATAAGTTCTTGTGCCGCCGGTGCGACCACT


HM370325_Swift_hap2 CTTTGCACCGATGACACTTTCCCATCAAAAACTCTAGTGTTGCGCTCTAGCCTTCATTAA
HM370331_Acrobat_hap3 CTTTGCACCGATGACACTTTCCCATCAAAAACTCTAGTGTTGCGCTCTAGCCTTCATTAA
HM370379_Token_hap4 CTTTGCACCGATGACACTTTCCCATCAAAAACTCTAGTGTTGCGCTCTAGCCTTCATTAA
HM370298_Duet_hap1 CTTTGCACCGATGACACTTTCCCATCAAAAACTCTAGTGTTGCGCTCTAGCCTTCATTAA


HM370325_Swift_hap2 TGTCAGTCAGCCGGTCTTGAACGACAATGAAGTCTTCCAAGTCGCCCACAACGTGAGGTT
HM370331_Acrobat_hap3 TGTCAGTCAGCCGGTCTTGAACGACAATGAAGTCTTCCAAGTCGCCCACAACGTGAGGTT
HM370379_Token_hap4 TGTCAGCCAGCCGGTCTTGAACGACAATGAAGTCTTCCAAGTCGCCCACAACGTGAGGTT
HM370298_Duet_hap1 TGTCAGCCAGCCGGTCTTGAACGACAATGAAGTCTTCCAAGTCGCCCACAACGTGAGGTT


HM370325_Swift_hap2 GCAAATCTACTTTGGTGAAGGCACATGTGCGTATAGCCCCAAATACGTGCACAGAAATTT
HM370331_Acrobat_hap3 GCAAATCTACTTTGGTGAAGGCACATGTGCGTATAGCCCCAAATACGTGCACAGAAATTT
HM370379_Token_hap4 GCAAATCTACTTTGGTGAAGGCACATGTGCGTATAGCCCCAAATACGTGCACAGAAATTT
HM370298_Duet_hap1 GCAAATCTACTTTGGTGAAGGCACATGTGCGTATAGCCCCAAATACGTGCACAGAAATTT


HM370325_Swift_hap2 GGCCACTTGATTTGCAAGAGAAGCGGTCAGAACATCCAAACAATCCACTCCCTCGCATCG
HM370331_Acrobat_hap3 GGCCACTTGATTTGCAAGAGAAGCGGTCAGAACATCCAAACAATCCACTCCCTCGCATCG
HM370379_Token_hap4 GGCCACTTGATTTGCAAGAGAAGCGGTCAGAACATCCAGACAATCCACTCCCTCGCATCG
HM370298_Duet_hap1 GGCCACTTGATTTGCAAGAGAAGCGGTCAGAACATCCAGACAATCCACTCCCTCGCATCG


HM370325_Swift_hap2 GGTAGGTGAAATCACATGTTTCTAAAGATTAACCACAAGACCAAAATCGCCACCAAATAA
HM370331_Acrobat_hap3 GGTAGGTGAAATCACATGTTTCTAAAGATTAACCACAAGACCAAAATCGCCACCAAATAA
HM370379_Token_hap4 GGTAGGTGAAATCACATGTTTCTAAAGATTAACCACAAGACCAAAATCGCCACCAAATAA
HM370298_Duet_hap1 GGTAGGTGAAATCACATGTTTCTAAAGATTAACCACAAGACCAAAATCGCCACCAAATAA


HM370325_Swift_hap2 CGTCAAAGATCTCCTTCCTTGCCAACAACTCGCTTTCTCTGGGTTTGAGGTAACCCGATA
HM370331_Acrobat_hap3 CGTCAAAGATCTCCTTCCTTGCCAACAACTCGCTTTCTCTGGGTTTGAGGTAACCCGATA
HM370379_Token_hap4 CGTCAAAGATCTCCTTCCTTGCCAACAACTCGCTTTCTCTGGGTTTGAGGTAACCCGATA
HM370298_Duet_hap1 CGTCAAAGATCTCCTTCCTTGCCAACAACTCGCTTTCTCTGGGTTTGAGGTAACCCGATA


HM370325_Swift_hap2 GCCGGTGACGAACACCCCATCTATCCAAAGGTTCAGACACACCAAAATCCTCCACTTTAT
HM370331_Acrobat_hap3 GCCGGTGACGAACACCCCATCTATCCAAAGGTTCAGACACACCAAAATCCTCCACTTTAT
HM370379_Token_hap4 GCCGGTGACGAACACCCCATCTATCCAAAGGTTCAGACACACCAAAATCCTCCACTTTAT
HM370298_Duet_hap1 GCCGGTGACGAACACCCCATCTATCCAAAGGTTCAGACACACCAAAATCCTCCACTTTAT


HM370325_Swift_hap2 TCCTTGTGCAGGTGGTAAAGCCCCTTGCCTCGTGGCATGACAATAGGTTGTCCTGATTTT
HM370331_Acrobat_hap3 TCCTTGTGCAGGTGGTAAAGCCCCTTGCCTCGTGGCATGACAATAGGTTGTCCTGATTTT
HM370379_Token_hap4 TCCTTGTGCAGGTGGTAAAGCCCCTTGCCTCGTGGCATGACAATAGGTTGTCCTGATTTT
HM370298_Duet_hap1 TCCTTGTGCAGGTGGTAAAGCCCCTTGCCTCGTGGCATGACAATAGGTTGTCCTGATTTT


HM370325_Swift_hap2 GTTTCTCGGATTCGTCATAAAGGGGAGGCTTTTATACCGTATGATTGAAAATTTTGTATT
HM370331_Acrobat_hap3 GTTTCTCGGATTCGTCATAAAGGGGAGGCTTTTATACCGTATGATTGAAAATTTTGTATT
HM370379_Token_hap4 GTTTCTCGGATTCGTCATAAAGGGGAGGCTTTTATACCGTATGATTGAAAATTTTGTATT
HM370298_Duet_hap1 GTTTCTCGGATTCGTCATAAAGGGGAGGCTTTTATACCGTATGATTGAAAATTTTGTATT


HM370325_Swift_hap2 CTATCAGTAAATTACGATAAATAAATAAAAATACTTCTTTTAATGTAAAATATATTCTTA
HM370331_Acrobat_hap3 CTATCAGTAAATTACGATAAATAAATAAAAATACTTCTTTTAATGTAAAATATATTCTTA
HM370379_Token_hap4 CTATCAGTAAATTACGATAAATAAATAAAAATACTTCTTTTAATGTAAAATATATTCTTA
HM370298_Duet_hap1 CTATCAGTAAATTACGATAAATAAATAAAAATACTTCTTTTAATGTAAAATATATTCTTA


HM370325_Swift_hap2 TACTATGTGACAACGGGAAGGCGGTACCGTTTGCTGGGGACACTCATTAAGTCATGAAGA
HM370331_Acrobat_hap3 TACTATGTGACAATGGGAAGGCTGTACCGTTTGCTCGGGACACTCATTAAGTCATGAAGA
HM370379_Token_hap4 TACTATGTGACAATGGGAAGGCTGTACCGTTTGCTCGGGACACTCATTAAGTCATGAAGA
HM370298_Duet_hap1 TACTATGTGACAATGGGAAGGCTGTACCGTTTGCTCGGGACACTCATTAAGTCATGAAGA


HM370325_Swift_hap2 CACAATACTACTAAATCAATCCATGAATTGTTTGAGTTCTTCACCAAATAAAATGCTACT
HM370331_Acrobat_hap3 CACAATACTACTAAATCAATCCATGAATTGTTTGAGTTCTTCACCAAATTAAATGCTACT
HM370379_Token_hap4 CACAATACTACTAAATCAATCCATGAATTGTTTGAGTTCTTCACCAAATTAAATGCTACT
HM370298_Duet_hap1 CACAATACTACTAAATCAATCCATGAATTGTTTGAGTTCTTCACCAAATTAAATGCTACT


HM370325_Swift_hap2 GTGCTGATTAATTCATTCGAATATAAGTTAAAAATTAACCAAAGCGCTATCAATCGATTT
HM370331_Acrobat_hap3 GTGCTGATTAATTCATTCGAATATAAGTTAAAAATTAACCAAAGCACTATCAATCGATTT
HM370379_Token_hap4 GTGCTGATTAATTCATTCGAATATAAGTTAAAAATTAACCAAAGCACTATCAATCGATTT
HM370298_Duet_hap1 GTGCTGATTAATTCATTCGAATATAAGTTAAAAATTAACCAAAGCACTATCAATCGATTT


HM370325_Swift_hap2 GCTAGGTTTTGGAGGACAGGGACATGGTGAACCGGATCAGCACATCTTTCTGGGACCTGA
HM370331_Acrobat_hap3 GCTAGGTTTTGGAGGACAGAGACATGGTGAACCGAATCAGCACATCTTTCTGGGACCTGA
HM370379_Token_hap4 GCTAGGTTTTGGAGGACAGAGACATGGTGAACCGAATCAGCACATCTTTCTGGGACCTGA
HM370298_Duet_hap1 GCTAGGTTTTGGAGGACAGGGACATGGTGAACCGGATCAGCACATCTTTCTGGGACCTGA


HM370325_Swift_hap2 AGATCCCAACAAGCTCGAAGCCGAAGGAGCCCTCCAGCCCATCAGCAGACGACGCTGGTG
HM370331_Acrobat_hap3 AGATCCCAACAAGCTCGAAGCCGAAGGAGCCCTCCAGCCCATCAGCAGACGACGCTGGTG
HM370379_Token_hap4 AGATCCCAACAAGCTCGAAGCCGAAGGAGCCCTCCAGCCCATCAGCAGACGACGCTGGTG
HM370298_Duet_hap1 AGATCCCAACAAGCTCGAAGCCGAAGGAGCCCTCCAGCCCATCAGCAGACGACGCTGGTG


HM370325_Swift_hap2 AGGCCGACATCGTGTTCCAAGACCTCGACCACAACACCATGGCCGCGATGATCCCCGGGG
HM370331_Acrobat_hap3 AGGCCGACATCGTGTTCCAAGACCTCGACCACAACACCATGGCCGCGATGATCCCCGGGG
HM370379_Token_hap4 AGGCCGACATCGTGTTCCAAGACCTCGACCACAACACCATGGCCGCGATGATCCCCGGGG
HM370298_Duet_hap1 AGGCCGACATCGTGTTCCAAGACCTCGACCACAACACCATGGCCGCGATGATCCCCGGGG


HM370325_Swift_hap2 AACTCGAGCTAGGGGAGGTCGAGTGCCTGTCCGACGACAACCTCGAGCGGATCACGAAGG
HM370331_Acrobat_hap3 AACTCGAGCTAGGGGAGGTCGAGTGCCTGTCCGACGACAACCTCGAGCGGATCACGAAGG
HM370379_Token_hap4 AACTCGAGCTAGGGGAGGTCGAGTGCCTGTCCGACGACAACCTCGAGCGGATCACGAAGG
HM370298_Duet_hap1 AACTCGAGCTAGGGGAGGTCGAGTGCCTGTCCGACGACAACCTCGAGCGGATCACGAAGG


HM370325_Swift_hap2 AGATCAACGGGTTCTACGGCCTCTGCGACGAGCTGGACGTCGGCGCTCTCGACGAAAACT
HM370331_Acrobat_hap3 AGATCAACGGGTTCTACGGCCTGTGCGACGAGCTGGACGTCGGCGCTCTCGACGAAAACT
HM370379_Token_hap4 AGATCAACGGGTTCTACGGCCTGTGCGACGAGCTGGACGTCGGCGCTCTCGACGAAAACT
HM370298_Duet_hap1 AGATCAACGGGTTCTACGGCCTCTGCGACGAGCTGGACGTCGGCGCTCTCGACGAAAACT


HM370325_Swift_hap2 GGATCATAGGCGGGTCTTTCGAGGTCATGTCCTCGCCGGAAGCGCCACCGGCGCCTGCAG
HM370331_Acrobat_hap3 GGATCATAGGCGGGTCTTTCGAGGTCATGTCCTCGCCGGAAGCGCCACCGGCGCCTGCAG
HM370379_Token_hap4 GGATCATAGGCGGGTCTTTCGAGGTCATGTCCTCGCCGGAAGCGCCACCGGCGCCTGCAG
HM370298_Duet_hap1 GGATCATAGGCGGGTCTTTCGAGGTCATGTCCTCGCCGGAAGCGCCACCGGCG-------


HM370325_Swift_hap2 CCACCGGCGGCATCACTGATGGTATTGTCACTTTAAGCGCCGCTGCGTCCTCTCTCTCAT
HM370331_Acrobat_hap3 CCACCGGCGGCATCACTGATGGTATTGTCACTTTAAGCGCCGCTGCGTCCTCTCTCTCAT
HM370379_Token_hap4 CCACCGGCGGCATCACTGATGGTATTGTCACTTTAAGCGCCGCTGCGTCCTCTCTCTCAT
HM370298_Duet_hap1 ---------GCATCACTGATGGTATTGTCACTTTAAGCGCCGCTGCGTCCTCTCTCTCAT


HM370325_Swift_hap2 CGTGCTTTACGGCTTGGAAGAGATCGTGGGACTCAGCCGAAGACATGGCTGCGCCGGTCG
HM370331_Acrobat_hap3 CGTGCTTTACGGCTTGGAAGAGATCGTGGGACTCAGCCGAAGACATGGCTGCGCCGGTCG
HM370379_Token_hap4 CGTGCTTTACGGCTTGGAAGAGATCGTGGGACTCAGCCGAAGACATGGCTGCGCCGGTCG
HM370298_Duet_hap1 CGTGCTTTACGGCTTGGAAGAGATCGTGGGACTCAGCCGAAGACATGGCTGCGCCGGTCG


HM370325_Swift_hap2 CCGGGCAGTCGCAGAAGTTACTGAAGAAAGCTTTGGCCGGTGGTGTGTGGGCGATTAACG
HM370331_Acrobat_hap3 CCGGGCAGTCGCAGAAGTTACTGAAGAAAGCTTTGGCCGGTGGTGCGTGGGCGATTAACG
HM370379_Token_hap4 CCGGGCAGTCGCAGAAGTTACTGAAGAAAGCTTTGGCCGGTGGTGCGTGGGCGATTAACG
HM370298_Duet_hap1 CCGGGCAGTCGCAGAAGTTACTGAAGAAAGCTTTGGCCGGTGGTGCGTGGGCGATTAACG


HM370325_Swift_hap2 GCGGCGGCGGCGGCGGCACGGCGAGAGCTCAGGAAAGTAGCAACACCAAGAACCATGTCA
HM370331_Acrobat_hap3 GCGGCGGCGGCGGCGGCACGGCGAGAGCTCAGGAAAGTAGCAACACCAAGAACCATGTCA
HM370379_Token_hap4 GCGGCGGCGGCGGCGGCACGGCGAGAGCTCAGGAAAGTAGCAACACCAAGAACCATGTCA
HM370298_Duet_hap1 GCGGCGGCGGCGGCGGCACGGCGAGAGCTCAGGAAAGTAGCAACACCAAGAACCATGTCA


HM370325_Swift_hap2 TATCGGAGAGGCGGCGCCGGGAGAAGCTCAACGAGATGTTCCTGATTCTCAAGTCACTGG
HM370331_Acrobat_hap3 TTTCGGAGAGGCGGCGCCGGGAGAAGCTCAACGAGATGTTCCTGATTCTCAAGTCACTGG
HM370379_Token_hap4 TTTCGGAGAGGCGGCGCCGGGAGAAGCTCAACGAGATGTTCCTGATTCTCAAGTCACTGG
HM370298_Duet_hap1 TTTCGGAGAGGCGGCGCCGGGAGAAGCTCAACGAGATGTTCCTGATTCTCAAGTCACTGG


HM370325_Swift_hap2 TGCCGTCCATTCACAAGGTAACACGCGCACATCACCGGAAAGCAAAAGAAAAAATACTTT
HM370331_Acrobat_hap3 TGCCGTCCATTCACAAGGTAACACGCGCACATCACCGGAAAGCAAAAGAAAAA-TACTGT
HM370379_Token_hap4 TGCCGTCCATTCACAAGGTAACACGCGCACATCACCGGAAAGCAAAAGAAAAA-TACTGT
HM370298_Duet_hap1 TGCCGTCCATTCACAAGGTAACACGCGCACATCACCGGAAAGCAAAAGAAAAA-TACTGT


HM370325_Swift_hap2 CCAGAGATGTGTTTCTGAACTTTTGTTTGCAGGTGGACAAGGCATCCATCCTAGCTGAGA
HM370331_Acrobat_hap3 CCAGAGATGTGTCTCTGAACTTTTGTTTGCAGGTGGACAAGGCATCCATCCTAGCTGAGA
HM370379_Token_hap4 CCAGAGATGTGTCTCTGAACTTTTGTTTGCAGGTGGACAAGGCATCCATCCTAGCTGAGA
HM370298_Duet_hap1 CCAGAGATGTGTCTCTGAACTTTTGTTTGCAGGTGGACAAGGCATCCATCCTAGCTGAGA


HM370325_Swift_hap2 CGATAGCCTATCTCAGAGAGCTGGAGCAAAGGGTGGAGGAGCTAGAATCCAACAGGGCGC
HM370331_Acrobat_hap3 CGATAGCCTATCTCAGAGAGCTGGAGCAAAGGGTGGAGGAGCTAGAATCCAACAGGGCGC
HM370379_Token_hap4 CGATAGCCTATCTCAGAGAGCTGGAGCAAAGGGTGGAGGAGCTAGAATCCAACAGGGCGC
HM370298_Duet_hap1 CGATAGCCTATCTCAGAGAGCTGGAGCAAAGGGTGGAGGAGCTAGAATCCAACAGGGCGC


HM370325_Swift_hap2 CGTCGCGGCCGGCCGGAGCAGCCGTCCGGAGACACCATGACGCCGCGGCGAAGAAGATGT
HM370331_Acrobat_hap3 CGTCGCGGCCGGCCGGAGCAGCCGTCCGGAGACACCATGACGCCGCGGCGAAGAAGATGT
HM370379_Token_hap4 CGTCGCGGCCGGCCGGAGCAGCCGTCCGGAGACACCATGACGCCGCGGCGAAGAAGATGT
HM370298_Duet_hap1 CGTCGCGGCCGGCCGGAGCAGCCGTCCGGAGACACCATGACACCGCCGGGAAGAAGACGT


HM370325_Swift_hap2 TAGCTGGATCCAAGAGAAAGGCGTCGGAGCTCGGCGGGGACGACGGCCCGAACAGCGTCG
HM370331_Acrobat_hap3 TAGCTGGATCCAAGAGAAAGGCGTCGGAGCTCGGCGGGGACGACGGCCCGAACAGCGTCG
HM370379_Token_hap4 TAGCTGGATCCAAGAGAAAGGCGTCGGAGCTCGGCGGGGACGACGGCCCGAACAGCGTCG
HM370298_Duet_hap1 TAGCTGGATCCAAGAGAAAGGCGTCGGAGCTCGGCGGGGACGACGGCCCGAACAGCGTCG


HM370325_Swift_hap2 TCAACGTCACGGTGACGGAGAAAGAGGTGCTCCTGGAGGTGCAATGCCGGTGGAAGGAGC
HM370331_Acrobat_hap3 TCAACGTCACGGTGATGGAGAAAGAGGTGCTCCTGGAGGTGCAATGCCGGTGGAAGGAGC
HM370379_Token_hap4 TCAACGTCACGGTGATGGAGAAAGAGGTGCTCCTGGAGGTGCAATGCCGGTGGAAGGAGC
HM370298_Duet_hap1 TCAACGTCACGGTGACGGAGAAAGAGGTGCTCCTGGAGGTGCAATGCCGGTGGAAGGAGC


HM370325_Swift_hap2 TGCTGATGACGCAGGTGTTCGACGCCATCAAGAGCCTCCGCCTGGACGTGCTCTCCGTGC
HM370331_Acrobat_hap3 TGCTGATGACGCAGGTGTTCGACGCCATCAAGAGCCTCCGCCTGGACGTGCTCTCCGTGC
HM370379_Token_hap4 TGCTGATGACGCAGGTGTTCGACGCCATCAAGAGCCTCCGCCTGGACGTGCTCTCCGTGC
HM370298_Duet_hap1 TGCTGATGACGCAGGTGTTCGACGCCATTAAGAGCCTCCGCCTGGACGTGCTCTCCGTGC


HM370325_Swift_hap2 GCGCGTCGACGCCCGACGGCCTCCTCGCTCTCAAGATACGAGCTCAGGTCCGTCTGGTAG
HM370331_Acrobat_hap3 GCGCGTCGACGCCCGACGGCCTCCTCGCTCTCAAGATACGAGCTCAGGTCCGTCTGGTAG
HM370379_Token_hap4 GCGCGTCGACGCCCGACGGCCTCCTCGCTCTCAAGATACGAGCTCAGGTCCGTCTGGTAG
HM370298_Duet_hap1 GCGCGTCGACGCCCGACGGCCTCCTCGCTCTCAAGATACGAGCTCAGGTCCGTCTGGTAG


HM370325_Swift_hap2 CAGCTGATTAACTTAGCTCCATCCGGCGGTAAAAAAATGCAGCATTAATTAACGCTCGTA
HM370331_Acrobat_hap3 CAGCTGATTATTTAAGCTCCATCCGGCGGTAAAAAA-TGCAGCATTAATTAACGCTCGTA
HM370379_Token_hap4 CAGCTGATTATTTAAGCTCCATCCGGCGGTAAAAAA-TGCAGCATTAATTAACGCTCGTA
HM370298_Duet_hap1 CAGCTGATTAACTTAGCTCCATCCGGCGGTAAAAAAATGCAGCATTAATTAACGCTCGTA


HM370325_Swift_hap2 TGCATGGCTATGGTTTACTGTTGCAGTTCGCCGGTCCTGGCGCCGTGGAGCCCGGGATGA
HM370331_Acrobat_hap3 TGCATGGCTATGGTTTACTGTTGCAGTTCGCCGGTCCTGGCGCCGTGGAGCCCGGGATGA
HM370379_Token_hap4 TGCATGGCTATGGTTTACTGTTGCAGTTCGCCGGTCCTGGCGCCGTGGAGCCCGGGATGA
HM370298_Duet_hap1 TGCATGGCTATGGTTTACTGTTGCAGTTCGCCGGTCCTGGCGCCGTGGAGCCCGGGATGA


HM370325_Swift_hap2 TCATCGGAGCGCTTCAGACAGCTACACGCGGGCGCTGAAAAAGAAGCATGCTGCTGAGAC
HM370331_Acrobat_hap3 TCATCGGAGCGCTTCAGACAGCTACACGAGGGCGCTGAAAAAGAAGCATGCTGCTGAGAC
HM370379_Token_hap4 TCATCGGAGCGCTTCAGACAGCTACACGAGGGCGCTGAAAAAGAAGCATGCTGCTGAGAC
HM370298_Duet_hap1 TCATCGGAGCGCTTCAGACAGCTACACGCGGGCGCTGAAAAAGAAGCATGCTGCTGAGAC


HM370325_Swift_hap2 ACTGGTACTGTACTGTAGA--------TCCGCGTCACGAGCTGGGACATACATGAAAGAT
HM370331_Acrobat_hap3 ACTGGTACTGTACTGTAGA--------TCCGCGTCACGAGCTGGGACATACATGAAAGAT
HM370379_Token_hap4 ACTGGTACTGTACTGTAGA--------TCCGCGTCACGAGCTGGGACATACATGAAAGAT
HM370298_Duet_hap1 ACTGGTACTGTACTGTAGAAGTGTAGATCCGCGTCACGAGCTGGGACATACATGAAAGAT


HM370325_Swift_hap2 TGACAATGATGGTGGCT
HM370331_Acrobat_hap3 TGACAATGATGGTGGCT
HM370379_Token_hap4 TGACAATGATGGTGGCT
HM370298_Duet_hap1 TGACAATGATGGTGGCT



Download file: HvANT2_C4289T_reference.aln
Validation plot
Genotype data
Accession Name Other Ref Genotype call (with filter) Reference sample of known genotype
Maris_Otter AFP 2/232 T
Golden_Promise AFP 2/235 C
Triumph AFP 2/278 C
Golf AFP 2/421 C
Klaxon AFP 2/456 C
Halycon AFP 2/514 C
Pipkin AFP 2/578 C
Dandy AFP 2/674 C
Blenheim AFP 2/688 C
Tyne AFP 2/750 C
Puffin AFP 2/806 C
Pastoral AFP 2/816 T
Posaune AFP 2/820 C
Gypsy AFP 2/884 C
Clarine AFP 2/899 T
Alexis AFP 2/904 C
Fighter AFP 2/947 T
Manitou AFP 2/951 C
Sprite AFP 2/954 C
Bronze AFP 2/994 C
Blanche AFP 2/1002 T
Derkado AFP 2/1011 C
Dallas AFP 2/1022 C
Graphic AFP 2/1029 C
Chariot AFP 2/1031 C
Willow AFP 2/1055 C
Swift AFP 2/1058 C
Intro AFP 2/1071 T
Felicie AFP 2/1091 C
Linnet AFP 2/1127 C
Delibes AFP 2/1133 C
Cooper AFP 2/1146 C
Brewster AFP 2/1147 C
Melanie AFP 2/1160 C
Sunrise AFP 2/1162 T
Rhythm AFP 2/1169 C
Tempo AFP 2/1170 T
Fanfare AFP 2/1171 C
Vivaldi AFP 2/1173 C
Emeraude AFP 2/1183 C
Hanna AFP 2/1184 C
Cork AFP 2/1187 C
Optic AFP 2/1188 C
Brahms AFP 2/1191 C
Canasta AFP 2/1194 C
Reggae AFP 2/1196 C
Riviera AFP 2/1203 C
Tokyo AFP 2/1210 C
Arctic AFP 2/1211 T
Muscat AFP 2/1214 C
Mystique AFP 2/1219 C
Prelude AFP 2/1221 C
Crown AFP 2/1230 T
Tankard AFP 2/1238 C
Wren AFP 2/1242 C
Ragtime AFP 2/1244 C
Clarity AFP 2/1246 C
Trinidad AFP 2/1256 C
Volley AFP 2/1262 T
Rifle AFP 2/1263 C
Cobalt AFP 2/1264 C
Tiffany AFP 2/1266 T
Antigua AFP 2/1276 C
Emilia AFP 2/1281 C
Spice AFP 2/1285 T
Quartet AFP 2/1291 C
Landlord AFP 2/1293 C
Rainbow AFP 2/1301 C
Charm AFP 2/1303 C
Torup AFP 2/1311 C
Pearl AFP 2/1318 C
Jewel AFP 2/1320 T
Baton AFP 2/1326 C
Spirit AFP 2/1334 T
Candy AFP 2/1345 C
Ricarda AFP 2/1350 C
Bistro AFP 2/1392 C
Angela AFP 2/1397 T
Heligan AFP 2/1402 T
Tabetha AFP 2/1404 T
Acorn AFP 2/1409 C
Century AFP 2/1410 C
Decanter AFP 2/1411 C
Linden AFP 2/1415 C
Acapella AFP 2/1419 C
Horizon AFP 2/1423 C
Static AFP 2/1427 C
Pongo AFP 2/1431 C
Opal AFP 2/1435 C
Wizard AFP 2/1442 T
Steeple AFP 2/1443 C
Arrow AFP 2/1445 T
Rounder AFP 2/1457 C
Siberia AFP 2/1463 C
Halifax AFP 2/1466 T
Artist AFP 2/1468 C
Leonie AFP 2/1471 T
Berwick AFP 2/1474 C
Otira AFP 2/1485 C
Potter AFP 2/1492 C
Saloon AFP 2/1501 C
Anvil AFP 2/1511 C
Haka AFP 2/1528 C
Sarah AFP 2/1534 T
Carola AFP 2/1535 T
Violet AFP 2/1540 T
Akita AFP 2/1555 C
Prestige AFP 2/1566 C
Prot AFP 2/1567 C
County AFP 2/1572 C
Pewter AFP 2/1575 C
Brise AFP 2/1576 C
Viskosa AFP 2/1579 C
Neruda AFP 2/1580 C
Agenda AFP 2/1589 C
Azure AFP 2/1591 C
Alabama AFP 2/1597 C
Pippa AFP 2/1599 C
Diamond AFP 2/1604 T
Carat AFP 2/1606 T
Tucker AFP 2/1608 T
Pict AFP 2/1626 C
Scylla AFP 2/1628 C
Spire AFP 2/1668 C
Spike AFP 2/1669 C
Sunbeam AFP 2/1697 T
Cannock AFP 2/1700 C
Kestrel AFP 2/1705 C
Sequel AFP 2/1717 C
Outlook AFP 2/1726 T
Mead AFP 2/1728 T
Rakaia AFP 2/1741 C
Pelican AFP 2/1745 C
Catalina AFP 2/1746 C
Cocktail AFP 2/1769 C
Brazil AFP 2/1780 C
Camion AFP 2/1825 C
Mandolin AFP 2/1841 C
Carafe AFP 2/1862 C
Toby AFP 2/1864 C
Doyen AFP 2/1865 C
Drum AFP 2/1867 C
Rebecca AFP 2/1871 C
Saffron AFP 2/1880 T
Amarena AFP 2/1886 T
Faraday AFP 2/1892 T
Balasun AFP 2/1902 T
Thalia AFP 2/1919 T
Concept AFP 2/1923 C
Westminster AFP 2/1939 C
Oxford AFP 2/1940 C
SW Macsena AFP 2/1951 C
Waggon AFP 2/1963 C
NFC Tipple AFP 2/1966 C
Timori AFP 2/1974 C
Colibri AFP 2/2003 C
Corsica AFP 2/2025 C
Rummy AFP 2/2034 C
Silicon AFP 2/2040 C
Tuscon AFP 2/2050 C
Centurion AFP 2/2054 C
Paramount AFP 2/2055 C
Accent AFP 2/2073 C
Pelican AFP 2/2077 T
Acrobat AFP 2/2102 C
Calico AFP 2/2104 C
Quench AFP 2/2121 C
Azalea AFP 2/2180 C
Tamise AFP 2/2188 C